UNIverse - Public Research Portal
Profile Photo

PD Dr. Morgan Sangeux

Department of Biomedical Engineering
Profiles & Affiliations

Clinical biomechanics

Gait analysis and musculoskeletal modelling

I am interested in the development of patient-specific musculoskeletal models of the human body to better understand and treat complex deformities. These models are mainly designed to address clinically relevant questions, but also to support the development of orthoses or prostheses.

The creation of personalised models requires extensive use and processing of medical imaging. I devised innovative processing pipelines to derive models and capture movement from magnetic resonance imaging (MRI). For example, I used MRI images to determine the kinematics of the knee joint in vivo, build finite element models to study the contact between the cartilage and the menisci, provides thickness maps of the cartilage, and study the material properties of the anterior cruciate ligament in vivo.

I created personalised models of the human lower limbs during gait. Typical medical imaging modalities (e.g. CT-scans, MRI) are collected supine instead of standing. There are large soft tissue artefacts between the supine and standing position which led me to design new medical imaging modalities I developed freehand 3D ultrasound, which merges traditional planar ultrasound with a motion capture system. This allows to reconstruct 3D images using the 3D positioning data of the ultrasound probe. We developed and validated the use of freehand 3D ultrasound to locate the hip joint centre, to locate the condylar axis of the femur, and to measure the torsion of the femur bone. We have also used freehand 3D ultrasound to measure a range of muscle properties. I have also further developed bi-planar x-ray (EOS) to merge imaging with gait data. We used the EOS system to evaluate the accuracy of models to determine the hip joint centre and the condylar axis in volunteering adults and in children with torsional deformities. EOS and freehand 3D ultrasound measurements were validated against a method I devised to measure clinical parameters of the femur bone shape using low-dose CT-scans.

As an example of clinical application, the personalised models were utilised to determine the effect of torsional deformities on hip and knee joint contact forces during gait. The outputs informed surgical decision making to derotate the femurs.

I am one of the leader of the new conventional gait model, which aims to update the biomechanical model used in clinical practice around the world, and allow full traceability of the effect the different versions have on the model outputs.


Statistical learning in clinical research

My clinical role led to research interests in orthopaedics, in statistics, and in machine learning.

Gait analysis informs surgical planning in children with musculoskeletal deformities. Many require multiple surgical procedures involving several muscles and bones. We investigated the short and long-term effect of various surgical procedures from monocentric and multicentric cohort studies. I developed new algorithms to perform computationally tasks previously based on the visual assessment of experts. Algorithms are more easily shared than experts, therefore these algorithms allow improved harmonisation of the analysis across centres. 

It is one thing to estimate the effect of deformities, or surgical procedures, but another, maybe more interesting, to provide an explanation for the observed effect. We investigated if radiographic measurements of the proximal femur and acetabulum could predict problems during gait in children post slipped capital femoral epiphysis. We also used correspondence analysis to investigate the statistical relationship between gait patterns and physical examination data.

I have developed a line of research in clinical statistical learning. It is customary to assess the gait of the patients before and after a surgical operation. This provide the opportunity to create statistical models to link the patients' gait to the surgical decisions, and to link the change in the patient’s gait to the surgical procedure. We developed statistical models 1- to capture clinical reasoning and 2- to link gait patterns with the outcomes post-surgery. The algorithms were implemented in a web-based computer-aided decision support system. Currently, I am leading a SPHN project to perform multicentric trial emulation from retrospective gait data.

Selected Publications

Chia K, Fischer I, Thomason P, Graham HK, & Sangeux M. (2020). A Decision Support System to Facilitate Identification of Musculoskeletal Impairments and Propose Recommendations Using Gait Analysis in Children With Cerebral Palsy. Frontiers in Bioengineering and Biotechnology, 8, 529415. https://doi.org/10.3389/fbioe.2020.529415

URLs
URLs

Leboeuf F, Baker R, Barré A, Reay J, Jones R, & Sangeux M. (2019). The conventional gait model, an open-source implementation that reproduces the past but prepares for the future. Gait & Posture, 69, 235–241. https://doi.org/10.1016/j.gaitpost.2019.04.015

URLs
URLs

Passmore E, Graham HK, Pandy MG, & Sangeux M. (2018). Hip- and patellofemoral-joint loading during gait are increased in children with idiopathic torsional deformities. Gait & Posture, 63, 228–235. https://doi.org/10.1016/j.gaitpost.2018.05.003

URLs
URLs

Sangeux M. (2018). Computation of hip rotation kinematics retrospectively using functional knee calibration during gait. Gait & Posture, 63, 171–176. https://doi.org/10.1016/j.gaitpost.2018.05.011

URLs
URLs

Sangeux M, Passmore E, Graham HK, & Tirosh O. (2016). The gait standard deviation, a single measure of kinematic variability. Gait & Posture, 46, 194–200. https://doi.org/10.1016/j.gaitpost.2016.03.015

URLs
URLs

Selected Projects & Collaborations

Project cover

Patient-specific musculoskeletal models to predict surgical outcome

Research Project  | 3 Project Members

Instrumented clinical gait analysis is used routinely to inform decision-making in neuro-orthopaedics. In addition to gait analysis, musculoskeletal modeling may become a powerful and non-invasive tool to guide clinical management and predict treatment outcomes. However, musculoskeletal modeling needs to integrate patient-specific adaptations, and its outputs need to be validated on a larger scale before it may be used in standard clinical practice.

The goal of this project is to develop patient-specific gait simulations by means of an open-source musculoskeletal modeling software. Results will be validated against existing clinical data pre vs post a typical intervention in neuro-orthopaedics.

Personalized musculoskeletal models from 30 children who received botulinum toxin injection will be developed from gait analysis data obtained before the intervention. To predict patient's response, the botulinum toxin effect will be simulated by weakening the model muscle and running a forward dynamic simulation. I will compare the outcome against existent data post-injection and analyze how induced muscle weakness alters the gait of children with cerebral palsy, providing validation for this specific musculoskeletal modeling application and overall confidence in our framework reliability.


Project cover

Getting high level of evidence for surgical treatments from routine clinical data. A real-world testing of the SPHN infrastructure - EVIGAITCP

Research Networks (Institutional Membership)  | 4 Project Members

Cerebral palsy is the first cause of disability with a prevalence of about 2.5 in 1000 children born in developed countries, that is about 250 children every year in Switzerland. The primary cause of cerebral palsy is a brain lesion occurring shortly before or after birth. The brain lesion is static and does not progress with time but secondary consequences, such as joint contractures and bony deformities develop during childhood and adolescence. A variety of surgical interventions and orthotics prescriptions may be performed to improve the biomechanical capacity of the musculoskeletal system once the deformities have developed.

However, ethical and practical difficulties to organise randomised controlled trials within the field of surgery have led to low or moderate level of evidence to support the interventions. In addition, different patients may respond markedly differently to the same treatment. In this context, the principles of evidence-based medicine are difficult to apply by clinicians when choosing the most appropriate treatment for a given child, or when discussing their rationale with the families.

Since the 90s, instrumented gait analysis has been utilised to inform the clinical decision-making process, plan the details of surgical interventions when these are deemed necessary, and evaluate the outcome of these interventions. Instrumented gait analysis provides quantitative and objective measures of the walking function. It generates a rich dataset composed of more than 50 scalar values describing the lower limb anatomy and functioning as well as more than 80 waveforms describing the walking pattern of the patients.


In this project, routine clinical data collected in two leading gait analysis centres at the UKBB (Basel) and at the HUG (Geneva) will be connected to the SPHN infrastructure. The objectives of the project are to ensure the SPHN | Swiss Personalized Health Network 2 | 4 interoperability of gait analysis data collected in different clinical centres in Switzerland and internationally, to determine the causal treatment effect of some of the most common orthopaedic treatments to improve walking in children with cerebral palsy, and to quantify the added value of multicentric observational datasets.

This project aims to lay the foundation for national, and international, gait analysis data interoperability as well as support evidence-based clinical decision-making in the field of neuro-orthopaedics for children with cerebral palsy. 

Project cover

CADENCE - Clinical Biomechanics and Ergonomics Engineering Equipment

Research Project  | 5 Project Members

In December 2021, the new research unit ‘Clinical Biomechanics and Ergonomics Engineering’ (CADENCE) was formed at Department of Biomedical Engineering (DBE) at the University of Basel (https://dbe.unibas.ch/en/research/biomechanics-and-biomaterials/cadence/) comprising the research groups ‘Functional Biomechanics’, ‘Robot-assisted Theragnostics’, ‘Paediatric Orthopaedic Biomechanics and Musculoskeletal Modelling’, and ‘Spine Biomechanics’. CADENCE facilitates innovative and groundbreaking interdisciplinary research in biomedical engineering and biomechanics and serves as teaching facility for courses on diagnostic and therapeutic technologies within the new Master of Science program and the PhD programs at the DBE. The R`Equip grant supports CADENCE in the purchase of a range of state-of-the-art sensor technologies and the world’s first 3D gait rehabilitation robot ‘The FLOAT’. This investment is critical for the unique and internationally leading role of the research groups in the research and innovation ecosystem in the Basel region.