[FG] Center for medical Image Analysis & Navigation

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Oliveira, M.L. et al. (2025) ‘Development and evaluation of a deep learning model to reduce exomass-related metal artefacts in cone-beam CT: an ex vivo study using porcine mandibles’, Dentomaxillofacial Radiology, 54(2), pp. 109–117. Available at: https://doi.org/10.1093/dmfr/twae062.

Prétot, Dominique et al. (2025) ‘Retinal oxygen metabolic function in choroideremia and retinitis pigmentosa’, Graefe’s Archive for Clinical and Experimental Ophthalmology, 263(2), pp. 379–385. Available at: https://doi.org/10.1007/s00417-024-06659-8.

Grobshäuser, Ellen et al. (2025) ‘Investigation of Endothelial Cell Density after PreserFlo Implantation Compared to Contralateral Eyes without PreserFlo Implantation-A Retrospective Analysis’, Klinische Monatsblatter fur Augenheilkunde, 242, pp. 392–397. Available at: https://doi.org/10.1055/a-2495-8580.

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Cédric, Schicklin (2025) Tendon-driven robot for biaxial perfusion of microvascularized organ-on-chip. Doctoral Thesis. University of Basel.

Corbaz, Hélène et al. (2025) ‘Towards Diagnostic Quality Flat-Panel Detector CT Imaging Using Diffusion Models’, in 5th International Workshop, SWITCH 2025. Daejeon, South Korea: Springer Science and Business Media Deutschland GmbH (Lecture Notes in Computer Science (LNCS)), pp. 12–21. Available at: https://doi.org/10.1007/978-3-032-07945-9_2.

Davaux, F. et al. (2025) ‘Attention Rings for Shape Analysis and Application to MRI Quality Control’, in Progress in Biomedical Optics and Imaging - Proceedings of SPIE. SPIE (Progress in Biomedical Optics and Imaging - Proceedings of SPIE). Available at: https://doi.org/10.1117/12.3047233.

Durrer, Alicia et al. (2025) ‘Denoising Diffusion Models for 3D Healthy Brain Tissue Inpainting’, in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) . Marrakesh, Morocco: Springer Science and Business Media Deutschland GmbH (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) ), pp. 87–97. Available at: https://doi.org/10.1007/978-3-031-72744-3_9.

Duverney, Cédric (2025) Robot-assisted systems for manipulation and machining of small-sized objects. Doctoral Thesis. University of Basel.

Friedrich, P., Frisch, Y. and Cattin, P.C. (2025) ‘Deep Generative Models for 3D Medical Image Synthesis’, in Generative Machine Learning Models in Medical Image Computing. Cham: Springer Nature Switzerland (Generative Machine Learning Models in Medical Image Computing), pp. 255–278. Available at: https://doi.org/10.1007/978-3-031-80965-1_13.

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Hong, Yoonmi et al. (2025) ‘Structural Connectome Gradients and Their Relationship to IQ in Early Childhood’, SSRN Working Paper [Preprint]. Elsevier BV (SSRN Working Paper). Available at: https://doi.org/10.2139/ssrn.5125937.

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Michaela Valerie Maintz (2025) Simulation-driven methods for the next generation of patient-specific osteosynthesis plates. Doctoral Thesis. University of Basel.

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Valmaggia, Philippe (2025) Eye and Heart Synchronisation: Development of Time-Resolved Optical Coherence Tomography with Electrocardiographic Coupling. Doctoral Thesis. Universität Basel.

Zeng, Jiafa et al. (2024) ‘Pharmacometabolomics via real-time breath analysis captures metabotypes of asthmatic children associated with salbutamol responsiveness’, iScience. 20.12.2024, 27(12). Available at: https://doi.org/10.1016/j.isci.2024.111446.

Cathomas, Marionna et al. (2024) ‘Safety and effectivity of Kono-S anastomosis in Crohn’s patients: a systematic review and Meta-analysis’, Langenbeck’s Archives of Surgery, 409(1). Available at: https://doi.org/10.1007/s00423-024-03412-x.

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Cathomas, Marionna et al. (2024) ‘Adherence to enhanced recovery after surgery (ERAS) in older adults following colorectal resection’, Journal of Geriatric Oncology. 12.09.2024, 15(8). Available at: https://doi.org/10.1016/j.jgo.2024.102062.

Schicklin, C. et al. (2024) ‘Method to Generate Chlorine Dioxide Gas In Situ for Sterilization of Automated Incubators’, Pathogens, 13(11), p. 1024. Available at: https://doi.org/10.3390/pathogens13111024.

Paul Friedrich, Yannik Frisch and Philippe C. Cattin (2024) ‘Deep Generative Models for 3D Medical Image Synthesis’. Available at: https://doi.org/10.48550/ARXIV.2410.17664.

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Schwartz, R. et al. (2024) ‘Genetic Distinctions Between Reticular Pseudodrusen and Drusen: Insights from a Genome-Wide Association Study’. Cold Spring Harbor Laboratory. Available at: https://doi.org/10.1101/2024.09.18.24313862.

de Vente, Coen et al. (2024) ‘Generalizable Deep Learning for the Detection of Incomplete and Complete Retinal Pigment Epithelium and Outer Retinal Atrophy: A MACUSTAR Report’, Translational Vision Science and Technology, 13(9). Available at: https://doi.org/10.1167/tvst.13.9.11.

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Maloca, Peter M. et al. (2024) ‘Human selection bias drives the linear nature of the more ground truth effect in explainable deep learning optical coherence tomography image segmentation’, Journal of Biophotonics, 17(2). Available at: https://doi.org/10.1002/jbio.202300274.

Ochs, Vincent et al. (2024) ‘An analysis of virtual reality in abdominal surgery—A scoping review’, International Journal of Medical Robotics and Computer Assisted Surgery, 20(1). Available at: https://doi.org/10.1002/rcs.2623.

Ochs, Vincent et al. (2024) ‘An analysis of virtual reality in abdominal surgery—A scoping review’, International Journal of Medical Robotics and Computer Assisted Surgery, 20(1). Available at: https://doi.org/10.1002/rcs.2623.

Taha-Mehlitz, Stephanie et al. (2024) ‘Is pain control for chronic neuropathic pain after inguinal hernia repair using endoscopic retroperitoneal neurectomy effective? A meta-analysis of 142 patients from 1995 to 2022’, Langenbeck’s Archives of Surgery, 408(1). Available at: https://doi.org/10.1007/s00423-022-02748-6.

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Durrer, Alicia, Cattin, Philippe C. and Wolleb, Julia (2024) ‘Denoising Diffusion Models for Inpainting of Healthy Brain Tissue’, in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) . Springer Science and Business Media Deutschland GmbH (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) ), pp. 35–45. Available at: https://doi.org/10.1007/978-3-031-76163-8_4.

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Wolleb, Julia et al. (2024) ‘Binary Noise for Binary Tasks: Masked Bernoulli Diffusion for Unsupervised Anomaly Detection’, in Lecture Notes in Computer Science. Cham: Springer Science and Business Media Deutschland GmbH (Lecture Notes in Computer Science), pp. 135–145. Available at: https://doi.org/10.1007/978-3-031-72120-5_13.

Zeng, J. (2024) Therapeutic monitoring in a pediatric clinical setting via breath analysis by high resolution mass spectrometry. Doctoral Thesis.

Denk, Nora et al. (2023) ‘Cynomolgus monkey’s retina volume reference database based on hybrid deep learning optical coherence tomography segmentation’, Scientific Reports, 13(1). Available at: https://doi.org/10.1038/s41598-023-32739-6.

Hamidi, Arsham et al. (2023) ‘Towards phase-sensitive optical coherence tomography in smart laser osteotomy: temperature feedback’, Lasers in Medical Science, 38(1). Available at: https://doi.org/10.1007/s10103-023-03886-z.

Hamidi, Arsham et al. (2023) ‘Multimodal feedback systems for smart laser osteotomy: Depth control and tissue differentiation’, Lasers in Surgery and Medicine. 23.10.2023, 55(10), pp. 900–911. Available at: https://doi.org/10.1002/lsm.23732.

Maloca, Peter M. et al. (2023) ‘Validation of collaborative cyberspace virtual reality oculometry enhanced with near real-time spatial audio’, Scientific Reports, 13(1). Available at: https://doi.org/10.1038/s41598-023-37267-x.

Ansari, Georg et al. (2023) ‘The Optical Coherence Tomography and Microperimetry Biomarker Evaluation in Patients with Geographic Atrophy (OMEGA) Study: Design and Baseline Characteristics - OMEGA Report 1’, Ophthalmic Research, 66(1), pp. 1392–1401. Available at: https://doi.org/10.1159/000535375.

Ochs, Vincent et al. (2023) ‘Development and validation of a predictive model of the hospital cost associated with bariatric surgery’, Obesity Research and Clinical Practice, 17(6), pp. 529–535. Available at: https://doi.org/10.1016/j.orcp.2023.10.003.