Animal Diversity and Evolution (Salzburger)

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Policarpo, M. et al. (2024) ‘The nature and distribution of putative non-functional alleles suggest only two independent events at the origins of Astyanax mexicanus cavefish populations’, BMC Ecology and Evolution, 24(1). Available at: https://doi.org/10.1186/s12862-024-02226-1.

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Mayo Ilodiri, W. et al. (2024) ‘Hidden species diversity in the Enteromius Cope, 1867 (Teleostei: Cyprinidae) from the Aruwimi basin (Middle Congo) in the Okapi Wildlife Reserve (Democratic Republic of the Congo)’, Journal of Fish Biology [Preprint]. Available at: https://doi.org/10.1111/jfb.15883.

Bigirimana, A. et al. (2024) ‘Description of a new endemic Enteromius (Teleostei: Cyprinidae) from the upper Malagarazi in Burundi: Lessons for a protected area under implementation’, Journal of Fish Biology [Preprint]. Available at: https://doi.org/10.1111/jfb.15652.

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Schedel, Frederic D.B. et al. (2024) ‘Surrounded by Great Lakes: Assessing the ichthyological diversity of Northern Zambian drainage systems’, Journal of Great Lakes Research, 50(3), p. 102245. Available at: https://doi.org/10.1016/j.jglr.2023.102245.

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Almeida, M.V. et al. (2024) ‘Dynamic co-evolution of transposable elements and the piRNA pathway in African cichlid fishes’. Cold Spring Harbor Laboratory. Available at: https://doi.org/10.1101/2024.04.01.587621.

Omelchenko, D. et al. (2024) ‘Hemoglobin gene repertoire in teleost and cichlid fishes shaped by gene duplications and genome rearrangements’. Cold Spring Harbor Laboratory. Available at: https://doi.org/10.1101/2024.03.26.586788.

Wang, M. et al. (2024) ‘Distinct Gene Regulatory Dynamics Drive Skeletogenic Cell Fate Convergence During Vertebrate Embryogenesis’. Cold Spring Harbor Laboratory. Available at: https://doi.org/10.1101/2024.03.26.586769.

Ruffener, Simona C., Matthey-de-l’Endroit, Nathalie and Berner, Daniel (2024) ‘Invasion of Pieris mannii butterflies across Central Europe facilitated by urbanization’, Urban Ecosystems. 05.02.2024, 27(4), pp. 1155–1165. Available at: https://doi.org/10.1007/s11252-024-01507-3.

Marconi, A. et al. (2024) ‘Genetic and developmental divergence in the neural crest programme between cichlid fish species’. Cold Spring Harbor Laboratory. Available at: https://doi.org/10.1101/2024.01.30.578004.

Costa, Vincenzo A. et al. (2024) ‘Host adaptive radiation is associated with rapid virus diversification and cross-species transmission in African cichlid fishes’, Current Biology, 34, pp. 1247–1257.e3. Available at: https://doi.org/10.1016/j.cub.2024.02.008.

Duque-Correa, Maria J. et al. (2024) ‘Diet and habitat as determinants of intestine length in fishes’, Reviews in Fish Biology and Fisheries, null. Available at: https://doi.org/10.1007/s11160-024-09853-3.

Haefeli, Anja et al. (2024) ‘Revision of the cichlid fish genus Gnathochromis (Teleostei: Cichlidae) from Lake Tanganyika with the description of a new genus Jabarichromis gen. nov.’, Zootaxa, 5410, pp. 434–450. Available at: https://doi.org/10.11646/zootaxa.5410.3.10.

Lovász, L. et al. (2024) ‘Rewilded horses in European nature conservation – a genetics, ethics, and welfare perspective’, Biological Reviews [Preprint]. Available at: https://doi.org/10.1111/brv.13146.

Mamos, Tomasz et al. (2024) ‘Distribution, diversity and diversification from DNA barcoding perspective: The case of Gammarus radiation in the ancient Lake Ohrid’, Journal of Biogeography, null. Available at: https://doi.org/10.1111/jbi.14822.

Piwoni-Piórewicz, A. et al. (2024) ‘Skeletal mineralogy of marine calcifying organisms shaped by seawater temperature and evolutionary history—A case study of cheilostome bryozoans’, Global Ecology and Biogeography [Preprint]. Available at: https://doi.org/10.1111/geb.13874.

Policarpo, Maxime et al. (2024) ‘Diversity and evolution of the vertebrate chemoreceptor gene repertoire’, Nature Communications, 15. Available at: https://doi.org/10.1038/s41467-024-45500-y.

Stelbrink, Björn et al. (2024) ‘Mitogenomes do not substantially improve phylogenetic resolution in a young non-model adaptive radiation of freshwater gastropods’, BMC Ecology and Evolution, 24. Available at: https://doi.org/10.1186/s12862-024-02235-0.

Fogg, Lily G. et al. (2023) ‘Multiple rod layers increase the speed and sensitivity of vision in nocturnal reef fishes’, Proceedings of the Royal Society B: Biological Sciences, 290(2011). Available at: https://doi.org/10.1098/rspb.2023.1749.

Muschick, Moritz et al. (2023) ‘Ancient DNA is preserved in fish fossils from tropical lake sediments’, Molecular Ecology. 13.10.2023, 32(22), pp. 5913–5931. Available at: https://doi.org/10.1111/mec.17159.

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Policarpo, M. et al. (2023) Diversity and evolution of the vertebrate chemoreceptor gene repertoire. Research Square Platform LLC. Available at: https://doi.org/10.21203/rs.3.rs-2922188/v1.

Syed, A.S. et al. (2023) ‘Ancient and Nonuniform Loss of Olfactory Receptor Expression Renders the Shark Nose a De Facto Vomeronasal Organ’, Molecular Biology and Evolution, 40(4). Available at: https://doi.org/10.1093/molbev/msad076.

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Wu, M.Y. et al. (2023) ‘Historic samples reveal loss of wild genotype through domestic chicken introgression during the Anthropocene’, PLoS Genetics, 19(1). Available at: https://doi.org/10.1371/journal.pgen.1010551.

Lichilín, Nicolás, Salzburger, Walter and Böhne, Astrid (2023) ‘No evidence for sex chromosomes in natural populations of the cichlid fish Astatotilapia burtoni’, G3-Genes Genomes Genetics, 13(3). Available at: https://doi.org/10.1093/g3journal/jkad011.

Berner, Daniel, Ruffener, Simona and Blattner, Lucas A. (2023) ‘Chromosome-Level Assemblies of the Pieris mannii Butterfly Genome Suggest Z-Origin and Rapid Evolution of the W Chromosome’, Genome Biology and Evolution, 15(6), p. evad111. Available at: https://doi.org/10.1093/gbe/evad111.

Casane, D. et al. (2023) ‘Evolutionary genomics and transcriptomics in groundwater animals’. Elsevier, pp. 393–412. Available at: https://doi.org/10.1016/B978-0-12-819119-4.00011-1.

De Weirdt, David, Huyghe, Charlotte Elisabeth Theodora and Vreven, Emmanuel Jean Michel Willem Nzambemalamu (2023) ‘On the occurrence and distribution of Synodontis nigrita and Synodontis violaceus (Siluriformes: Mochokidae) in the Nilo-Sudan, and Upper and Lower Guinea ichthyofaunal provinces’, Journal of Fish Biology, 103, pp. 741–746. Available at: https://doi.org/10.1111/jfb.15414.

Fogg, Lily G. et al. (2023) ‘Developing and adult reef fish show rapid light-induced plasticity in their visual system’, Molecular Ecology, 32(1), pp. 167–181. Available at: https://doi.org/10.1111/mec.16744.

Heuertz M. et al. (2023) ‘The application gap: Genomics for biodiversity and ecosystem service management’, Biological Conservation, 278. Available at: https://doi.org/10.1016/j.biocon.2022.109883.

Huyghe, Charlotte E. T. et al. (2023) ‘Opportunistic feeding habits of two African freshwater clupeid fishes: DNA metabarcoding unravels spatial differences in diet and microbiome, and identifies new prey taxa’, Hydrobiologia, 850, pp. 3777–3796. Available at: https://doi.org/10.1007/s10750-023-05267-7.

Legendre, L. et al. (2023) ‘Genetic identification and reiterated captures suggest that the Astyanax mexicanus El Pachón cavefish population is closed and declining’, Zoological Research, 44(4), pp. 701–711. Available at: https://doi.org/10.24272/j.issn.2095-8137.2022.481.

Sithole, Yonela et al. (2023) ‘A new species of Parauchenoglanis (Auchenoglanididae: Siluriformes) from the Upper Lualaba River (Upper Congo), with further evidence of hidden species diversity within the genus’, Journal of Fish Biology, 102, pp. 1387–1414. Available at: https://doi.org/10.1111/jfb.15309.

Willink, B. and Wu, M.Y. (2023) ‘To colour a bird: The evolution of carotenoid-based colouration in passerines is shaped by sexual selection, ecology and life history’, Journal of Animal Ecology, 92(1), pp. 4–6. Available at: https://doi.org/10.1111/1365-2656.13840.

Wu, M.Y. et al. (2023) ‘Genomic data reveal shift in geographic source of an illegally traded songbird’, Conservation Genetics [Preprint]. Available at: https://doi.org/10.1007/s10592-023-01564-9.

Wu, M.Y. and Rheindt, F.E. (2023) ‘Continent-wide vocal leapfrog pattern in Collared Scops Owls obfuscates species boundaries’, Avian Research, 14. Available at: https://doi.org/10.1016/j.avrs.2023.100141.

Legendre, L. et al. (2022) ‘Genetic identification and reiterated captures suggests that the Astyanax mexicanus El Pachón cavefish population is closed and declining’. Cold Spring Harbor Laboratory. Available at: https://doi.org/10.1101/2022.12.01.518679.

Policarpo, M. et al. (2022) ‘Coevolution of the olfactory organ and its receptor repertoire in ray-finned fishes’, BMC Biology, 20(1). Available at: https://doi.org/10.1186/s12915-022-01397-x.

Vernaz, G. et al. (2022) ‘Epigenetic divergence during early stages of speciation in an African crater lake cichlid fish’, Nature Ecology and Evolution, 6(12), pp. 1940–1951. Available at: https://doi.org/10.1038/s41559-022-01894-w.

Syed, A.S. et al. (2022) ‘Ancient and nonuniform loss of olfactory receptor expression renders the shark nose a de facto vomeronasal organ’. Cold Spring Harbor Laboratory. Available at: https://doi.org/10.1101/2022.11.27.518102.

Todd, E.T. et al. (2022) ‘The genomic history and global expansion of domestic donkeys’, Science, 377(6611), pp. 1172–1180. Available at: https://doi.org/10.1126/science.abo3503.

Fogg, Lily G. et al. (2022) ‘Development of dim-light vision in the nocturnal reef fish family Holocentridae. I: Retinal gene expression’, Journal of Experimental Biology, 225(17). Available at: https://doi.org/10.1242/jeb.244513.

Fogg, Lily G. et al. (2022) ‘Development of dim-light vision in the nocturnal reef fish family Holocentridae. II: Retinal morphology’, Journal of Experimental Biology, 225(17). Available at: https://doi.org/10.1242/jeb.244740.

Fogg, Lily G. (2022) Seeing in a changing sea: Development, plasticity, and ecology of the visual system in marine teleosts, Queensland Brain Institute. . Translated by Fanny de Busserolles, Fabio Cortesi, Justin Marshall. University of Queensland. Available at: https://doi.org/10.14264/24bd923.

Leclercq, J. et al. (2022) ‘Evolution of the regulation of developmental gene expression in blind Mexican cavefish’. Cold Spring Harbor Laboratory. Available at: https://doi.org/10.1101/2022.07.12.499770.

Almeida, M.V. et al. (2022) ‘Taming transposable elements in vertebrates: from epigenetic silencing to domestication’, Trends in Genetics, 38(6), pp. 529–553. Available at: https://doi.org/10.1016/j.tig.2022.02.009.

Laurentino, Telma G. et al. (2022) ‘The ectodysplasin-A receptor is a candidate gene for lateral plate number variation in stickleback fish’, G3-Genes Genomes Genetics, 6(12). Available at: https://doi.org/10.1093/g3journal/jkac077.

Matschiner, M. et al. (2022) ‘Supergene origin and maintenance in Atlantic cod’, Nature Ecology and Evolution, 6(4), pp. 469–481. Available at: https://doi.org/10.1038/s41559-022-01661-x.

Clavel, B. et al. (2022) ‘Sex in the city: Uncovering sex-specific management of equine resources from prehistoric times to the Modern Period in France’, Journal of Archaeological Science: Reports, 41. Available at: https://doi.org/10.1016/j.jasrep.2022.103341.

Astudillo-Clavijo, Viviana et al. (2022) ‘Exon-based phylogenomics and the relationships of African cichlid fishes: tackling the challenges of reconstructing phylogenies with repeated rapid radiations’, Systematic Biology, pp. 1–16. Available at: https://doi.org/10.1093/sysbio/syac051.

Da Silva, Marcos A. et al. (2022) ‘Species diversity and phylogeography of the Australoheros autrani group (Teleostei, Cichlidae) in eastern Brazil’, Ichthyological Research, pp. 1–8. Available at: https://doi.org/10.1007/s10228-022-00888-9.

Ricci, Virginie et al. (2022) ‘Molecular evolution and depth-related adaptations of rhodopsin in the adaptive radiation of cichlid fishes in Lake Tanganyika’, Molecular Ecology, 31(10), pp. 2882–2897. Available at: https://doi.org/10.1111/mec.16429.

Schedel, Frederic D. B. et al. (2022) ‘Towards the phylogenetic placement of the enigmatic African genus Prolabeops Schultz, 1941’, Journal of Fish Biology, 101(5), pp. 1333–1342. Available at: https://doi.org/10.1111/jfb.15205.

Sommer-Trembo, Carolin et al. (2022) ‘Does the presence of conspecifics facilitate exploratory behaviour in a cichlid fish (Etroplus suratensis)?’, Behaviour, 159(10), pp. 899–914. Available at: https://doi.org/10.1163/1568539x-bja10156.

Lepetz, S. et al. (2021) ‘Historical management of equine resources in France from the Iron Age to the Modern Period’, Journal of Archaeological Science: Reports, 40. Available at: https://doi.org/10.1016/j.jasrep.2021.103250.

Librado, P. et al. (2021) ‘The origins and spread of domestic horses from the Western Eurasian steppes’, Nature, 598(7882), pp. 634–640. Available at: https://doi.org/10.1038/s41586-021-04018-9.

Lecchini, David et al. (2021) ‘Assessment of ecological status of the lagoon of Bora-Bora Island (French Polynesia)’, Regional Studies in Marine Science, 43. Available at: https://doi.org/10.1016/j.rsma.2021.101687.

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Berner, Daniel (2021) ‘Re-evaluating the evidence for facilitation of stickleback speciation by admixture in the Lake Constance basin’, Nature communications, 12(1), p. 2806. Available at: https://doi.org/10.1038/s41467-021-23092-1.

El Taher, Athimed et al. (2021) ‘Gene expression dynamics during rapid organismal diversification in African cichlid fishes’, Nature Ecology and Evolution, 5(2), pp. 243–250. Available at: https://doi.org/10.1038/s41559-020-01354-3.

El Taher, Athimed et al. (2021) ‘Dynamics of sex chromosome evolution in a rapid radiation of cichlid fishes’, Science Advances, 7(36), p. eabe8215. Available at: https://doi.org/10.1126/sciadv.abe8215.

Haenel, Quiterie et al. (2021) ‘The maintenance of standing genetic variation: Gene flow vs. selective neutrality in Atlantic stickleback fish’, Molecular ecology, 31(3), pp. 811–821. Available at: https://doi.org/10.1111/mec.16269.

Haenel, Quiterie et al. (2021) ‘Clinal genomic analysis reveals strong reproductive isolation across a steep habitat transition in stickleback fish’, Nature communications, 12(1), p. 4850. Available at: https://doi.org/10.1038/s41467-021-25039-y.

Lecchini, David et al. (2021) ‘Marine biodiversity of a pristine coral reef in french polynesia’, Island Studies Journal, 16(1), pp. 292–307. Available at: https://doi.org/10.24043/isj.150.

Musilova, Zuzana, Salzburger, Walter and Cortesi, Fabio (2021) ‘The Visual Opsin Gene Repertoires of Teleost Fishes: Evolution, Ecology, and Function’, Annual Review of Cell and Developmental Biology, 37, pp. 441–468. Available at: https://doi.org/10.1146/annurev-cellbio-120219-024915.

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Rajkov, Jelena et al. (2021) ‘Gene expression remodelling and immune response during adaptive divergence in an African cichlid fish’, Molecular Ecology, 30(1), pp. 274–296. Available at: https://doi.org/10.1111/mec.15709.

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Ronco, Fabrizia and Salzburger, Walter (2021) ‘Tracing evolutionary decoupling of oral and pharyngeal jaws in cichlid fishes’, Evolution Letters, 5(6), pp. 625–635. Available at: https://doi.org/10.1002/evl3.257.

Ronco, Fabrizia and Salzburger, Walter (2021) ‘The non-gradual nature of adaptive radiation’, Zoology, 146, p. 125925. Available at: https://doi.org/10.1016/j.zool.2021.125925.

Svardal, Hannes, Salzburger, Walter and Malinsky, Milan (2021) ‘Genetic Variation and Hybridization in Evolutionary Radiations of Cichlid Fishes’, Annual Review of Animal Biosciences, 9, pp. 55–79. Available at: https://doi.org/10.1146/annurev-animal-061220-023129.

Viertler, Alexandra, Salzburger, Walter and Ronco, Fabrizia (2021) ‘Comparative scale morphology in the adaptive radiation of cichlid fishes (Perciformes: Cichlidae) from Lake Tanganyika’, Biological Journal of the Linnean Society, 134, pp. 541–556. Available at: https://doi.org/10.1093/biolinnean/blab099.

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Waqalevu, Viliame et al. (2020) ‘Interplay between hormonal and morphological changes throughout a critical period of larval rearing in the orbicular batfish’, Aquaculture Reports, 18. Available at: https://doi.org/10.1016/j.aqrep.2020.100521.

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Cortesi, Fabio et al. (2020) ‘Visual system diversity in coral reef fishes’, Seminars in Cell and Developmental Biology, 106, pp. 31–42. Available at: https://doi.org/10.1016/j.semcdb.2020.06.007.

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Berli, Barbara Isabelle (2020) Population genetic case studies of salmonids in the region of Basel (Switzerland). . Translated by Salzburger Walter. Dissertation.

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El Taher, Athimed (2020) Unraveling transcriptome dynamics in Lake Tanganyika cichlid fishes. . Translated by Salzburger Walter. Dissertation.

Haenel, Quiterie (2020) The genomic basis of adaptation in threespine stickleback fish. . Translated by Salzburger Walter; Berner Daniel. Dissertation.

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