Molecular Microbiology (Bumann)

Antelo-Varela, Minia, Bumann, Dirk and Schmidt, Alexander (2024) ‘Optimizing SureQuant for Targeted Peptide Quantification: a Technical Comparison with PRM and SWATH-MS Methods’, Analytical Chemistry, 96(45), pp. 18061–18069. Available at: https://doi.org/10.1021/acs.analchem.4c03622.

Huessy, Benjamin, Bumann, Dirk and Ebert, Dieter (2023) ‘Ectopical expression of bacterial collagen-like protein supports its role as adhesin in host-parasite coevolution’. bioRxiv. Available at: https://doi.org/10.1101/2023.07.14.549037.

Dogga, Sunil Kumar et al. (2022) ‘Importance of aspartyl protease 5 in the establishment of the intracellular niche during acute and chronic infection of Toxoplasma gondii’, Molecular Microbiology, 118(6), pp. 601–622. Available at: https://doi.org/10.1111/mmi.14987.

Hinnu, Mariliis et al. (2022) ‘Making Antimicrobial Susceptibility Testing More Physiologically Relevant with Bicarbonate?’, Antimicrobial Agents and Chemotherapy, 66(5), p. e0241221. Available at: https://doi.org/10.1128/aac.02412-21.

Luscher, Alexandre et al. (2022) ‘Plant-Derived Catechols Are Substrates of TonB-Dependent Transporters and Sensitize Pseudomonas aeruginosa to Siderophore-Drug Conjugates’, mBio, 13(4), p. e0149822. Available at: https://doi.org/10.1128/mbio.01498-22.

Bhamidimarri, Satya Prathyusha et al. (2021) ‘Acquisition of ionic copper by the bacterial outer membrane protein OprC through a novel binding site’, PLoS Biology, 19(11), p. e3001446. Available at: https://doi.org/10.1371/journal.pbio.3001446.

Dehinwal, Ruchika et al. (2021) ‘Increased Production of Outer Membrane Vesicles by Salmonella Interferes with Complement-Mediated Innate Immune Attack’, mBio, 12(3), p. e0086921. Available at: https://doi.org/10.1128/mbio.00869-21.

Haschka, David et al. (2021) ‘Ferritin H deficiency deteriorates cellular iron handling and worsens Salmonella typhimurium infection by triggering hyperinflammation’, JCI insight, 6(13), p. e141760. Available at: https://doi.org/10.1172/jci.insight.141760.

Huemer, Markus et al. (2021) ‘Molecular reprogramming and phenotype switching in; Staphylococcus aureus; lead to high antibiotic persistence and affect therapy success’, Proceedings of the National Academy of Sciences of the United States of America, 118(7), p. e2014920118. Available at: https://doi.org/10.1073/pnas.2014920118.

Li, Jiagui et al. (2021) ‘Tissue compartmentalization enables; Salmonella; persistence during chemotherapy’, Proceedings of the National Academy of Sciences of the United States of America, 118(51), p. e2113951118. Available at: https://doi.org/10.1073/pnas.2113951118.

Ude, Johanna et al. (2021) ‘Outer membrane permeability: Antimicrobials and diverse nutrients bypass porins in Pseudomonas aeruginosa’, Proceedings of the National Academy of Sciences of the United States of America, 118(31), p. e2107644118. Available at: https://doi.org/10.1073/pnas.2107644118.

Cianfanelli, Francesca Romana, Cunrath, Olivier and Bumann, Dirk (2020) ‘Efficient Dual-Negative Selection for Bacterial Genome Editing’. bioRxiv. Available at: https://doi.org/10.1101/2020.03.03.974816.

Cunrath, Olivier et al. (2020) ‘The pathogen; Pseudomonas aeruginosa; optimizes the production of the siderophore pyochelin upon environmental challenges’, Metallomics, 12(12), pp. 2108–2120. Available at: https://doi.org/10.1039/d0mt00029a.

Hausmann, Annika et al. (2020) ‘Intestinal epithelial NAIP/NLRC4 restricts systemic dissemination of the adapted pathogen Salmonella Typhimurium due to site-specific bacterial PAMP expression’, Mucosal Immunology, 13(3), pp. 530–544. Available at: https://doi.org/10.1038/s41385-019-0247-0.

Mas, Guillaume et al. (2020) ‘Regulation of chaperone function by coupled folding and oligomerization’, Science advances, 6(43), p. eabc5822. Available at: https://doi.org/10.1126/sciadv.abc5822.

Roche, Béatrice and Bumann, Dirk (2020) ‘Single-cell reporters for pathogen responses to antimicrobial host attacks’, Current opinion in microbiology, 59, pp. 16–23. Available at: https://doi.org/10.1016/j.mib.2020.07.013.

Rosas-Ballina, Mauricio et al. (2020) ‘Classical Activation of Macrophages Leads to Lipid Droplet Formation Without; de novo; Fatty Acid Synthesis’, Frontiers in Immunology, 11, p. 131. Available at: https://doi.org/10.3389/fimmu.2020.00131.

Wolf, Tobias et al. (2020) ‘Dynamics in protein translation sustaining T cell preparedness’, Nature immunology, 21(8), pp. 927–937. Available at: https://doi.org/10.1038/s41590-020-0714-5.

Bhamidimarri, Satya Prathyusha et al. (2019) ‘A Multidisciplinary Approach toward Identification of Antibiotic Scaffolds for Acinetobacter baumannii’, Structure (London, England : 1993), 27(2), p. 268–+. Available at: https://doi.org/10.1016/j.str.2018.10.021.

Bumann, Dirk (2019) ‘Salmonella; Single-Cell Metabolism and Stress Responses in Complex Host Tissues’, Microbiology spectrum, 7(2), pp. BAI–0009–2019. Available at: https://doi.org/10.1128/microbiolspec.bai-0009-2019.

Bumann, Dirk et al. (2019) ‘Antibiotic chemotherapy against heterogeneous pathogen populations in complex host tissues’, F1000Research, 8, p. 1781. Available at: https://doi.org/10.12688/f1000research.19441.1.

Carballido Lopez, Ana et al. (2019) ‘Non-specific interference of cobalt with siderophore-dependent iron uptake pathways’, Metallomics : integrated biometal science, 11(11), pp. 1937–1951. Available at: https://doi.org/10.1039/c9mt00195f.

Cunrath, Oliver and Bumann, Dirk (2019) ‘Host resistance factor SLC11A1 restricts Salmonella growth through magnesium deprivation’, Science, 366(6468), pp. 995–999. Available at: https://doi.org/10.1126/science.aax7898.

Cunrath, Olivier et al. (2019) ‘Quantitative contribution of efflux to multi-drug resistance of clinical Escherichia coli and Pseudomonas aeruginosa strains’, EBioMedicine, 41, pp. 479–487. Available at: https://doi.org/10.1016/j.ebiom.2019.02.061.

Eren, Elif et al. (2019) ‘Type-3 Secretion System-induced pyroptosis protects Pseudomonas against cell-autonomous immunity’. bioRxiv. Available at: https://doi.org/10.1101/650333.

Trebosc, Vincent et al. (2019) ‘Dissecting Colistin Resistance Mechanisms in Extensively Drug-Resistant Acinetobacter baumannii Clinical Isolates’, mBio, 10(4), pp. e01083–19. Available at: https://doi.org/10.1128/mbio.01083-19.

Lim, Daejin et al. (2018) ‘The hepcidin-ferroportin axis controls the iron content of Salmonella-containing vacuoles in macrophages’, Nature communications, 9(1), p. 2091. Available at: https://doi.org/10.1038/s41467-018-04446-8.

Luscher, Alexandre et al. (2018) ‘TonB-Dependent Receptor Repertoire of Pseudomonas aeruginosa for Uptake of Siderophore-Drug Conjugates’, Antimicrobial agents and chemotherapy, 62(6), pp. e00097–18. Available at: https://doi.org/10.1128/aac.00097-18.

Napolitani, Giorgio et al. (2018) ‘Clonal analysis of Salmonella-specific effector T cells reveals serovar-specific and cross-reactive T cell responses’, Nature immunology, 19(7), pp. 742–754. Available at: https://doi.org/10.1038/s41590-018-0133-z.

Samanta, Susruta et al. (2018) ‘Getting Drugs through Small Pores: Exploiting the Porins Pathway in Pseudomonas aeruginosa’, ACS infectious diseases, 4(10), pp. 1519–1528. Available at: https://doi.org/10.1021/acsinfecdis.8b00149.

Abellón-Ruiz, Javier et al. (2017) ‘Structural basis for maintenance of bacterial outer membrane lipid asymmetry’, Nature Microbiology, 2(12), pp. 1616–1623. Available at: https://doi.org/10.1038/s41564-017-0046-x.

Bumann, Dirk and Cunrath, Olivier (2017) ‘Heterogeneity of Salmonella-host interactions in infected host tissues’, Current Opinion in Microbiology, 39, pp. 57–63. Available at: https://doi.org/10.1016/j.mib.2017.09.008.

Bumann, Dirk and Schothorst, Joep (2017) ‘Intracellular Salmonella metabolism’, Cellular Microbiology, 19(10), p. e12766. Available at: https://doi.org/10.1111/cmi.12766.

Dehio, Christoph and Bumann, Dirk (2017) ‘Editorial overview: Bacterial systems biology’, Current Opinion in Microbiology, 39, pp. viii–xi. Available at: https://doi.org/10.1016/j.mib.2017.11.024.

Schürmann, Nura et al. (2017) ‘Myeloperoxidase targets oxidative host attacks to Salmonella and prevents collateral tissue damage’, Nature Microbiology, 2(4), p. 16268. Available at: https://doi.org/10.1038/nmicrobiol.2016.268.

Wu, Aimin et al. (2017) ‘Salmonella Utilizes Zinc To Subvert Antimicrobial Host Defense of Macrophages via Modulation of NF-κB Signaling’, Infection and Immunity, 85(12), pp. e00418–17. Available at: https://doi.org/10.1128/iai.00418-17.

Freed, Nikki E., Bumann, Dirk and Silander, Olin K. (2016) ‘Combining Shigella Tn-seq data with gold-standard E. coli gene deletion data suggests rare transitions between essential and non-essential gene functionality’, BMC Microbiology, 16(1), p. 203. Available at: https://doi.org/10.1186/s12866-016-0818-0.

Gasser, Véronique et al. (2016) ‘Catechol siderophores repress the pyochelin pathway and activate the enterobactin pathway in Pseudomonas aeruginosa: an opportunity for siderophore-antibiotic conjugates development’, Environmental Microbiology, 18(3), pp. 819–32. Available at: https://doi.org/10.1111/1462-2920.13199.

Trebosc, Vincent et al. (2016) ‘A novel genome editing platform for drug resistant Acinetobacter baumannii revealed an AdeR-unrelated tigecycline resistance mechanism’, Antimicrobial Agents and Chemotherapy, 60(12), pp. 7263–7271. Available at: https://doi.org/10.1128/aac.01275-16.

Abu Kwaik, Yousef and Bumann, Dirk (2015) ‘Host delivery of favorite meals for intracellular pathogens’, PLoS Pathogens, 11(6), p. e1004866. Available at: https://doi.org/10.1371/journal.ppat.1004866.

Bumann, Dirk (2015) ‘Heterogeneous Host-Pathogen Encounters: Act Locally, Think Globally’, Cell Host & Microbe, pp. 13–9. Available at: https://doi.org/10.1016/j.chom.2014.12.006.

Martano, Giuseppe et al. (2015) ‘Fast sampling method for mammalian cell metabolic analyses using liquid chromatography-mass spectrometry’, Nature Protocols, 10(1), pp. 1–11. Available at: https://doi.org/10.1038/nprot.2014.198.

McEwan, David G. et al. (2015) ‘PLEKHM1 Regulates Salmonella-Containing Vacuole Biogenesis and Infection’, Cell Host & Microbe, 17(1), pp. 58–71. Available at: https://doi.org/10.1016/j.chom.2014.11.011.

Bumann, Dirk (2014) ‘Identification of protective antigens for vaccination against systemic salmonellosis’, Frontiers in Immunology, 5(381), p. 381. Available at: https://doi.org/10.3389/fimmu.2014.00381.

Burton, Neil A. et al. (2014) ‘Disparate Impact of Oxidative Host Defenses Determines the Fate of Salmonella during Systemic Infection in Mice’, Cell Host & Microbe, 15(1), pp. 72–83. Available at: https://doi.org/10.1016/j.chom.2013.12.006.

Claudi, Beatrice et al. (2014) ‘Phenotypic variation of salmonella in host tissues delays eradication by antimicrobial chemotherapy’, Cell, 158(4), pp. 722–733. Available at: https://doi.org/10.1016/j.cell.2014.06.045.

Kentner, David et al. (2014) ‘Shigella reroutes host cell central metabolism to obtain high-flux nutrient supply for vigorous intracellular growth’, Proceedings of the National Academy of Sciences of the United States of America, 111(27), pp. 9929–34. Available at: https://doi.org/10.1073/pnas.1406694111.

Maze, Alain, Glatter, Timo and Bumann, Dirk (2014) ‘The central metabolism regulator EIIAGlc switches Salmonella from growth arrest to acute virulence through activation of virulence factor secretion’, Cell reports, 7(5), pp. 1426–1433. Available at: https://doi.org/10.1016/j.celrep.2014.04.022.

Kwaik, Yousef Abu and Bumann, Dirk (2013) ‘Microbial quest for food in vivo : ‘Nutritional virulence’ as an emerging paradigm’, Cellular Microbiology, 15(6), pp. 882–890. Available at: https://doi.org/10.1111/cmi.12138.

Steeb, Benjamin et al. (2013) ‘Parallel exploitation of diverse host nutrients enhances salmonella virulence’, PLoS Pathogens, 9(4), p. e1003301. Available at: https://doi.org/10.1371/journal.ppat.1003301.

Barat, Somedutta et al. (2012) ‘Extensive in vivo resilience of persistent Salmonella’, PLoS ONE, 7(7), p. e42007. Available at: https://doi.org/10.1371/journal.pone.0042007.

Barat, Somedutta et al. (2012) ‘Immunity to intracellular Salmonella depends on surface-associated antigens’, PLoS Pathogens, 8(10), p. e1002966. Available at: https://doi.org/10.1371/journal.ppat.1002966.

Leschner, Sara et al. (2012) ‘Identification of tumor-specific Salmonella Typhimurium promoters and their regulatory logic’, Nucleic Acids Research, 40(7), pp. 2984–94. Available at: https://doi.org/10.1093/nar/gkr1041.

Mary, Camille et al. (2012) ‘Functional Identification of APIP as Human mtnB, a Key Enzyme in the Methionine Salvage Pathway’, PLoS ONE, 7(12), p. e52877. Available at: https://doi.org/10.1371/journal.pone.0052877.

Schrimpf, Sabine P. et al. (2012) ‘The initiative on Model Organism Proteomes (iMOP) Session September 6, 2011, Geneva, Switzerland’, Proteomics, pp. 346–350. Available at: https://doi.org/10.1002/pmic.201290015.

Willer, Yvonne, Müller, Beatrice and Bumann, Dirk (2012) ‘Intestinal inflammation responds to microbial tissue load independent of pathogen/non-pathogen discrimination’, PLoS ONE, 7(5), p. e35992. Available at: https://doi.org/10.1371/journal.pone.0035992.

Crull, K., Bumann, D. and Weiss, S. (2011) ‘Influence of infection route and virulence factors on colonization of solid tumors by Salmonella enterica serovar Typhimurium’, FEMS Immunology and Medical Microbiology, 62(1), pp. 75–83. Available at: https://doi.org/10.1111/j.1574-695x.2011.00790.x.

Hänisch, J. et al. (2011) ‘Activation of a RhoA/Myosin II-Dependent but Arp2/3 Complex-Independent Pathway Facilitates Salmonella Invasion’, Cell Host & Microbe, 9(4), pp. 273–85. Available at: https://doi.org/10.1016/j.chom.2011.03.009.

Pawelczyk, S., Bumann, D. and Abraham, W. R. (2011) ‘Kinetics of carbon sharing in a bacterial consortium revealed by combining stable isotope probing with fluorescence-activated cell sorting’, Journal of Applied Microbiology, 110(4), pp. 1065–73. Available at: https://doi.org/10.1111/j.1365-2672.2011.04964.x.

Stelter, C. et al. (2011) ‘Salmonella-Induced Mucosal Lectin RegIIIbeta Kills Competing Gut Microbiota’, PLoS ONE, 6(6), p. e20749. Available at: https://doi.org/10.1371/journal.pone.0020749.

Thiele, I. et al. (2011) ‘A community effort towards a knowledge-base and mathematical model of the human pathogen Salmonella Typhimurium LT2’, BMC Systems Biology, 5(8), pp. 1–9. Available at: https://doi.org/10.1186/1752-0509-5-8.

Wild, P. et al. (2011) ‘Phosphorylation of the Autophagy Receptor Optineurin Restricts Salmonella Growth’, Science, 333(6039), pp. 228–33. Available at: https://doi.org/10.1126/science.1205405.

Bumann, Dirk (2010) ‘Pathogen proteomes during infection : a basis for infection research and novel control strategies’, Journal of Proteomics, 73(11), pp. 2267–76. Available at: https://doi.org/10.1016/j.jprot.2010.08.004.

Bumann, D. et al. (2009) ‘Systemic, nasal and oral live vaccines against Pseudomonas aeruginosa : a clinical trial of immunogenicity in lower airways of human volunteers’, Vaccine, 28(3), pp. 707–13. Available at: https://doi.org/10.1016/j.vaccine.2009.10.080.

Bumann, Dirk (2009) ‘System-level analysis of Salmonella metabolism during infection’, Current Opinion in Microbiology, 12(5), pp. 559–67. Available at: https://doi.org/10.1016/j.mib.2009.08.004.

de Buhr, M. F. et al. (2009) ‘Analysis of Cd14 as a genetic modifier of experimental inflammatory bowel disease (IBD) in mice’, Inflammatory Bowel Diseases, 15(12), pp. 1824–36. Available at: https://doi.org/10.1002/ibd.21030.

Hänisch, J. et al. (2009) ‘Molecular dissection of Salmonella-induced membrane ruffling versus invasion’, Cellular Microbiology, 12(1), pp. 84–98. Available at: https://doi.org/10.1111/j.1462-5822.2009.01380.x.

Aebischer, T. et al. (2008) ‘Correlation of T cell response and bacterial clearance in human volunteers challenged with Helicobacter pylori revealed by randomised controlled vaccination with Ty21a-based Salmonella vaccines’, Gut, 57(8), pp. 1065–72. Available at: https://doi.org/10.1136/gut.2007.145839.

Bumann, D. (2008) ‘Has nature already identified all useful antibacterial targets?’, Current Opinion in Microbiology, 11(5), pp. 387–392. Available at: https://doi.org/10.1016/j.mib.2008.08.002.

Bumann, D. and Buss, L. (2008) ‘Nutritional physiology and colony form in Podocoryna carnea (Cnidaria: Hydrozoa)’, Invertebrate Biology, 127(4), pp. 368–380. Available at: https://doi.org/10.1111/j.1744-7410.2008.00135.x.

Bumann, D. and Valdivia, R. H. (2007) ‘Identification of host-induced pathogen genes by differential fluorescence induction reporter systems’, Nature Protocols, 2(4), pp. 770–7. Available at: https://doi.org/10.1038/nprot.2007.78.

Halle, S. et al. (2007) ‘Solitary intestinal lymphoid tissue provides a productive port of entry for Salmonella enterica serovar Typhimurium’, Infection and Immunity, 75(4), pp. 1577–85. Available at: https://doi.org/10.1128/iai.01392-06.

Kirchhoff, D. et al. (2007) ‘Identification and isolation of murine antigen-reactive T cells according to CD154 expression’, European Journal of Immunology, 37(9), pp. 2370–7. Available at: https://doi.org/10.1002/eji.200737322.

Thone, F. et al. (2007) ‘FACS-isolation of Salmonella-infected cells with defined bacterial load from mouse spleen’, Journal of Microbiological Methods, 71(3), pp. 220–4. Available at: https://doi.org/10.1016/j.mimet.2007.08.016.

Becker, D. et al. (2006) ‘Robust Salmonella metabolism limits possibilities for new antimicrobials’, Nature, 440(7082), pp. 303–7. Available at: https://doi.org/10.1038/nature04616.

Rollenhagen, C. and Bumann, D. (2006) ‘Salmonella enterica highly expressed genes are disease specific’, Infection and Immunity, 74(3), pp. 1649–60. Available at: https://doi.org/10.1128/iai.74.3.1649-1660.2006.

Sabarth, N. et al. (2005) ‘Identification of Helicobacter pylori surface proteins by selective proteinase K digestion and antibody phage display’, Journal of Microbiological Methods, 62(3), pp. 345–9. Available at: https://doi.org/10.1016/j.mimet.2005.04.030.

Arnold, H. et al. (2004) ‘Enhanced immunogenicity in the murine airway mucosa with an attenuated Salmonella live vaccine expressing OprF-OprI from Pseudomonas aeruginosa’, Infection and Immunity, 72(11), pp. 6546–53. Available at: https://doi.org/10.1128/iai.72.11.6546-6553.2004.

Bumann, D. et al. (2004) ‘Lack of stage-specific proteins in coccoid Helicobacter pylori cells’, Infection and Immunity, 72(11), pp. 6738–42. Available at: https://doi.org/10.1128/iai.72.11.6738-6742.2004.

Bumann, D., Jungblut, P. R. and Meyer, T. F. (2004) ‘Helicobacter pylori vaccine development based on combined subproteome analysis’, Proteomics, 4(10), pp. 2843–8. Available at: https://doi.org/10.1002/pmic.200400909.

Metzger, W. G. et al. (2004) ‘Impact of vector-priming on the immunogenicity of a live recombinant Salmonella enterica serovar typhi Ty21a vaccine expressing urease A and B from Helicobacter pylori in human volunteers’, Vaccine, 22(17-18), pp. 2273–7. Available at: https://doi.org/10.1016/j.vaccine.2003.11.020.

Rollenhagen, C. et al. (2004) ‘Antigen selection based on expression levels during infection facilitates vaccine development for an intracellular pathogen’, Proceedings of the National Academy of Sciences of the United States of America, 101(23), pp. 8739–44. Available at: https://doi.org/10.1073/pnas.0401283101.

Bumann, D. (2003) ‘T cell receptor-transgenic mouse models for studying cellular immune responses to Salmonella in vivo’, FEMS Immunology and Medical Microbiology, 37(2-3), pp. 105–9. Available at: https://doi.org/10.1016/s0928-8244(03)00064-6.

Bumann, D., Jungblut, P. R. and Meyer, T. F. (2003) ‘Helicobacter vaccine development based on global approaches’, Genome Letters, 2(1-2), pp. 94–98. Available at: https://doi.org/10.1166/gl.2003.000.

Daugelat, S. et al. (2003) ‘The RD1 proteins of Mycobacterium tuberculosis : expression in Mycobacterium smegmatis and biochemical characterization’, Microbes and Infection, 5(12), pp. 1082–1095. Available at: https://doi.org/10.1016/s1286-4579(03)00205-3.

Rizos, K. et al. (2003) ‘Autodisplay : efficacious surface exposure of antigenic UreA fragments from Helicobacter pylori in Salmonella vaccine strains’, Infection and Immunity, 71(11), pp. 6320–8. Available at: https://doi.org/10.1128/iai.71.11.6320-6328.2003.

Sorensen, M. et al. (2003) ‘Rapidly maturing red fluorescent protein variants with strongly enhanced brightness in bacteria’, FEBS Letters, 552(2-3), pp. 110–4. Available at: https://doi.org/10.1016/s0014-5793(03)00856-1.

Bumann, D. (2002) ‘Examination of Salmonella gene expression in an infected mammalian host using the green fluorescent protein and two-colour flow cytometry’, Molecular Microbiology, 43(5), pp. 1269–83. Available at: https://doi.org/10.1046/j.1365-2958.2002.02821.x.

Bumann, D. et al. (2002) ‘Proteome analysis of secreted proteins of the gastric pathogen Helicobacter pylori’, Infection and Immunity, 70(7), pp. 3396–403. Available at: https://doi.org/10.1128/iai.70.7.3396-3403.2002.

Bumann, D. et al. (2002) ‘A comparison of murine and human immunoproteomes of Helicobacter pylori validates the preclinical murine infection model for antigen screening’, Infection and Immunity, 70(11), pp. 6494–6498. Available at: https://doi.org/10.1128/iai.70.11.6494-6498.2002.

Jungblut, Peter R. and Bumann, Dirk (2002) ‘Immunoproteome of Helicobacter pylori’, Methods in Enzymology, 358, pp. 307–316. Available at: https://doi.org/10.1016/s0076-6879(02)58097-6.

Sabarth, N. et al. (2002) ‘Multiparameter selection of Helicobacter pylori antigens identifies two novel antigens with high protective efficacy’, Infection and Immunity, 70(11), pp. 6499–503. Available at: https://doi.org/10.1128/iai.70.11.6499-6503.2002.

Sabarth, N. et al. (2002) ‘Identification of surface proteins of Helicobacter pylori by selective biotinylation, affinity purification, and two-dimensional gel electrophoresis’, Journal of Biological Chemistry, 277(31), pp. 27896–902. Available at: https://doi.org/10.1074/jbc.m204473200.

Wendland, M. and Bumann, D. (2002) ‘Optimization of GFP levels for analyzing Salmonella gene expression during an infection’, FEBS Letters, 521(1-3), pp. 105–8. Available at: https://doi.org/10.1016/s0014-5793(02)02834-x.

Bumann, D. (2001) ‘Regulated antigen expression in live recombinant Salmonella enterica serovar Typhimurium strongly affects colonization capabilities and specific CD4(+)-T-cell responses’, Infection and Immunity, 69(12), pp. 7493–7500. Available at: https://doi.org/10.1128/iai.69.12.7493-7500.2001.

Bumann, D. (2001) ‘In vivo visualization of bacterial colonization, antigen expression, and specific T-cell induction following oral administration of live recombinant Salmonella enterica serovar Typhimurium’, Infection and Immunity, 69(7), pp. 4618–4626. Available at: https://doi.org/10.1128/iai.69.7.4618-4626.2001.

Bumann, D. et al. (2001) ‘Safety and immunogenicity of live recombinant Salmonella enterica serovar Typhi Ty21a expressing urease A and B from Helicobacter pylori in human volunteers’, Vaccine, 20(5-6), pp. 845–52. Available at: https://doi.org/10.1016/s0264-410x(01)00391-7.

Lucas, B. et al. (2001) ‘Adoptive transfer of CD4+ T cells specific for subunit A of Helicobacter pylori urease reduces H. pylori stomach colonization in mice in the absence of interleukin-4 (IL-4)/IL-13 receptor signaling’, Infection and Immunity, 69(3), pp. 1714–21. Available at: https://doi.org/10.1128/iai.69.3.1714-1721.2001.

Aebischer, T. et al. (2000) ‘How CD4(+) T cells may eliminate extracellular gastric Helicobacter?’, Journal of Biotechnology, 83(1-2), pp. 77–84. Available at: https://doi.org/10.1016/s0168-1656(00)00301-1.

Bumann, D. et al. (2000) ‘Recombinant live Salmonella spp. for human vaccination against heterologous pathogens’, FEMS Immunology and Medical Microbiology, 27(4), pp. 357–64. Available at: https://doi.org/10.1111/j.1574-695x.2000.tb01450.x.