[CF] Micro- & Nanotomography

Vergne, Celine et al. (2025) ‘Electromagnetic tracking system for position and orientation detection of deep brain stimulation electrodes during surgery’, IEEE Transactions on Biomedical Engineering [Preprint]. Available at: https://doi.org/10.1109/TBME.2025.3529716.

Viertler, Alexandra et al. (2024) ‘Three taphonomic stories of three new fossil species of Darwin wasps (Hymenoptera, Ichneumonidae)’, Scientific Reports, 14(1). Available at: https://doi.org/10.1038/s41598-024-67466-z.

Müller, Bert (2024) ‘Recent advancements in microtomography’, Developments in X-Ray Tomography XV, p. 48. Available at: https://doi.org/10.1117/12.3021765.

Filippon, Ignacio et al. (2024) ‘Determining Aligner-Induced Tooth Movements in Three Dimensions Using Clinical Data of Two Patients’, Oral, 4(4), pp. 487–504. Available at: https://doi.org/10.3390/oral4040039.

Viertler, Alexandra et al. (2024) ‘Three taphonomic stories of three new fossil species of Darwin wasps (Hymenoptera, Ichneumonidae)’, Scientific Reports, 14(1). Available at: https://doi.org/10.1038/s41598-024-67466-z.

Arroteia, Isabel Fernandes et al. (2024) ‘Assessment of transitional care in pediatric neurosurgery: a single-center analysis and survey of patients and parents’, Neurosurgical Focus, 57. Available at: https://doi.org/10.3171/2024.5.FOCUS24232.

Borlongan, Cesar V. et al. (2024) ‘Nose-to-brain delivery of stem cells in stroke: the role of extracellular vesicles’, Stem Cells Translational Medicine, 13, pp. 1043–1052. Available at: https://doi.org/10.1093/stcltm/szae072.

Costeur, Loïc, Friesenhagen, Thore and Schulz, Georg (2024) ‘X-ray microtomography of fossil types in natural history collections’. SPIE. Available at: https://doi.org/10.1117/12.3028651.

Fasel, Lorin et al. (2024) ‘Antagonistic Series Elastic Actuation for a Variable Stiffness Robotic Endoscope’, IEEE/ASME Transactions on Mechatronics, pp. 1–11. Available at: https://doi.org/10.1109/TMECH.2024.3484583.

Greuter, Ladina et al. (2024) ‘Pediatric neurosurgery training during residency in Switzerland and the need for dedicated subspecialization training’, Child’s Nervous System, 40, pp. 1889–1900. Available at: https://doi.org/10.1007/s00381-024-06343-6.

Greuter, Ladina et al. (2024) ‘Endoscopic third ventriculostomy compared to ventriculoperitoneal shunt as treatment for idiopathic normal pressure hydrocephalus: a systematic review and meta-analysis’, British Journal of Neurosurgery, 38, pp. 1276–1282. Available at: https://doi.org/10.1080/02688697.2022.2149697.

Hallenberger, Tim Jonas et al. (2024) ‘Management of external ventricular drain: to wean or not to wean?’, Acta Neurochirurgica, 166. Available at: https://doi.org/10.1007/s00701-024-06166-z.

Hallenberger, Tim J. et al. (2024) ‘Pituitary germinoma after resection of a mature third ventricular teratoma: illustrative case’, Journal of Neurosurgery: Case Lessons, 8. Available at: https://doi.org/10.3171/CASE2443.

Hench, Jürgen et al. (2024) ‘EpiDiP/NanoDiP: a versatile unsupervised machine learning edge computing platform for epigenomic tumour diagnostics’, Acta Neuropathologica Communications, 12. Available at: https://doi.org/10.1186/s40478-024-01759-2.

Humbel, Mattia et al. (2024) ‘Detection of cardiac-induced motion in murine cerebrospinal fluid space captured in vivo with synchrotron radiation-based microtomography’. Available at: https://doi.org/10.1117/12.3028460.

Humbel, Mattia et al. (2024) ‘A tomography slice through the entire human brain with less than three micrometer voxels’. Available at: https://doi.org/10.1117/12.3030304.

Humbel, Mattia et al. (2024) ‘Comparison of large-volume imaging approaches using computed tomography’. Available at: https://doi.org/10.1117/12.3028566.

Jonas Hallenberger, Tim et al. (2024) ‘Patient-Reported Neurocognitive Outcome After Endoscopic Ventricular Surgery’, World Neurosurgery, 190, pp. e381–e393. Available at: https://doi.org/10.1016/j.wneu.2024.07.144.

Karnam, Murali et al. (2024) ‘Robot-Assisted Neuroendoscopy: Surgeon’s Third Hand-A Proof of Concept Study’, pp. 49–52. Available at: https://doi.org/10.1515/cdbme-2024-1064.

Kürner, Katja et al. (2024) ‘Pediatric sellar teratoma – Case report and review of the literature’, Child’s Nervous System, 40, pp. 1259–1270. Available at: https://doi.org/10.1007/s00381-024-06296-w.

Levano, Soledad et al. (2024) ‘Evaluation of the noise-exposed cochlea using synchrotron radiation-based microtomography’. Available at: https://doi.org/10.1117/12.3028091.

Licci, Maria et al. (2024) ‘Palliative single-level selective dorsal rhizotomy for children with spastic cerebral palsy Gross Motor Function Classification System level IV and V: a case series and systematic review of the literature’, Neurosurgical Focus, 56. Available at: https://doi.org/10.3171/2024.3.FOCUS2478.

Licci, Maria et al. (2024) ‘Predictive Value of Sonographic Parameters on the Effects of Cranial Molding Helmet Therapy in Infants with Positional Plagiocephaly’, Diagnostics, 14. Available at: https://doi.org/10.3390/diagnostics14131407.

Lyko, Beate et al. (2024) ‘In vitro testing of an artificial muscle for the treatment of incontinence’, in SPIE, Electroactive Polymer Actuators and Devices. Long Beach, USA (SPIE, Electroactive Polymer Actuators and Devices). Available at: https://doi.org/10.1117/12.3012817.

Maintz, Michaela et al. (2024) ‘Fronto-orbital advancement with patient-specific 3D-printed implants and robot-guided laser osteotomy: an in vitro accuracy assessment’, International Journal of Computer Assisted Radiology and Surgery [Preprint]. Available at: https://doi.org/10.1007/s11548-024-03298-6.

Martins, Tomás A. et al. (2024) ‘Enhancing anti-EGFRvIII CAR T cell therapy against glioblastoma with a paracrine SIRPγ-derived CD47 blocker’, Nature Communications, 15. Available at: https://doi.org/10.1038/s41467-024-54129-w.

Müller, Bert (2024) ‘On the cusp of x-ray tomographic mapping of the human brain and its 10 11 cells’, in SPIE, Developments in X-Ray Tomography XV,. San Diego (SPIE, Developments in X-Ray Tomography XV,). Available at: https://doi.org/10.1117/12.3032298.

Müller, Bert (2024) ‘Tribute to Ulrich Bonse: his doctoral thesis on x-ray imaging of strain fields around dislocations in germanium single crystals’, in SPIE, Developments in X-Ray Tomography XV,. San Diego (SPIE, Developments in X-Ray Tomography XV,). Available at: https://doi.org/10.1117/12.3028587.

Müller, B. and Wang, G. (2024) ‘Introduction’, Proceedings of SPIE - The International Society for Optical Engineering, 13152. Available at: https://doi.org/10.1117/12.3054104.

Poletti, Nicolas et al. (2024) ‘Fulminant hemorrhagic course of a thalamic H3 K27-altered diffuse midline glioma in an adult patient: illustrative case’, Journal of Neurosurgery: Case Lessons, 7. Available at: https://doi.org/10.3171/CASE23598.

Saemann, Attill et al. (2024) ‘Assessment of Interrater Reliability and Accuracy of Cerebral Aneurysm Morphometry Using 3D Virtual Reality, 2D Digital Subtraction Angiography, and 3D Reconstruction: A Randomized Comparative Study’, Brain Sciences, 14. Available at: https://doi.org/10.3390/brainsci14100968.

Savatović, S. et al. (2024) ‘Multi-resolution X-ray phase-contrast and dark-field tomography of human cerebellum with near-field speckles’, Biomedical Optics Express, 15(1), pp. 142–161. Available at: https://doi.org/10.1364/BOE.502664.

Schönegg, Daphne et al. (2024) ‘Three-dimensional hard X-ray micro-tomographic imaging of the human palatal anatomy and gracilis muscle’. Available at: https://doi.org/10.1117/12.3035601.

Schulz, Georg et al. (2024) ‘Non-destructive imaging of internal structures of a mosquito with sub-micrometer resolution’. Available at: https://doi.org/10.1117/12.3029450.

Smolensky, Ilya et al. (2024) ‘Effects of single housing on behavior, corticosterone level and body weight in male and female mice’, Laboratory Animal Research, 40(1). Available at: https://doi.org/10.1186/s42826-024-00221-7.

Smolensky, Ilya et al. (2024) ‘Correction: Effects of single housing on behavior, corticosterone level and body weight in male and female mice (Laboratory Animal Research, (2024), 40, 1, (35), 10.1186/s42826-024-00221-7)’, Laboratory Animal Research, 40. Available at: https://doi.org/10.1186/s42826-024-00223-5.

Sveikata, Lukas et al. (2024) ‘Changing the landscape of neurological education’, The Lancet Neurology, 23, pp. 1078–1079. Available at: https://doi.org/10.1016/S1474-4422(24)00366-1.

Tripkis, Dimitrios et al. (2024) ‘Hard X-ray nanotomography of dental composites for wide color matching’. Available at: https://doi.org/10.1117/12.3012813.

Kuo, W. et al. (2023) ‘Terabyte-scale supervised 3D training and benchmarking dataset of the mouse kidney’, Scientific Data, 10(1). Available at: https://doi.org/10.1038/s41597-023-02407-5.

Sanli, U.T. et al. (2023) ‘Apochromatic X-ray focusing’, Light: Science and Applications, 12(1). Available at: https://doi.org/10.1038/s41377-023-01157-8.

Viertler, Alexandra et al. (2023) ‘Correction: Impact of increasing morphological information by micro-CT scanning on the phylogenetic placement of Darwin wasps (Hymenoptera, Ichneumonidae) in amber (Swiss Journal of Palaeontology, (2023), 142, 1, (30), 10.1186/s13358-023-00294-2)’, Swiss Journal of Palaeontology, 142(1). Available at: https://doi.org/10.1186/s13358-023-00299-x.

Viertler, Alexandra et al. (2023) ‘Impact of increasing morphological information by micro-CT scanning on the phylogenetic placement of Darwin wasps (Hymenoptera, Ichneumonidae) in amber’, Swiss Journal of Palaeontology, 142(1). Available at: https://doi.org/10.1186/s13358-023-00294-2.

Rodgers, Griffin et al. (2023) ‘3D X-ray Histology for the Investigation of Temporal Lobe Epilepsy in a Mouse Model’, Microscopy and Microanalysis, 29(5), pp. 1730–1745. Available at: https://doi.org/10.1093/micmic/ozad082.

Rodgers, Griffin et al. (2023) ‘3D X-ray Histology for the Investigation of Temporal Lobe Epilepsy in a Mouse Model’, Microscopy and Microanalysis, 29(5), pp. 1730–1745. Available at: https://doi.org/10.1093/micmic/ozad082.

Bolten, Jan Stephan et al. (2023) ‘Zebrafish (Danio rerio) larvae as a predictive model to study gentamicin-induced structural alterations of the kidney’, PLoS ONE, 18(4 APRIL), p. e0284562. Available at: https://doi.org/10.1371/journal.pone.0284562.

Bolten, Jan Stephan et al. (2023) ‘Zebrafish (Danio rerio) larvae as a predictive model to study gentamicin-induced structural alterations of the kidney’, PLoS ONE, 18(4 APRIL). Available at: https://doi.org/10.1371/journal.pone.0284562.

Bolten, Jan Stephan et al. (2023) ‘Zebrafish (Danio rerio) larvae as a predictive model to study gentamicin-induced structural alterations of the kidney’, PLoS ONE, 18(4 APRIL), p. e0284562. Available at: https://doi.org/10.1371/journal.pone.0284562.

Mennecart B. et al. (2022) ‘Ruminant inner ear shape records 35 million years of neutral evolution’, Nature Communications, 13(1). Available at: https://doi.org/10.1038/s41467-022-34656-0.

Joodaki M. et al. (2022) ‘Micro-patterned cellulose films for flexible electrodes in medical implants’, Micro and Nano Engineering, 16. Available at: https://doi.org/10.1016/j.mne.2022.100162.

Rodgers G. et al. (2022) ‘Combining High-Resolution Hard X-ray Tomography and Histology for Stem Cell-Mediated Distraction Osteogenesis’, Applied Sciences (Switzerland), 12(12). Available at: https://doi.org/10.3390/app12126286.

Ammann R. et al. (2022) ‘Three-dimensional analysis of aligner gaps and thickness distributions, using hard x-ray tomography with micrometer resolution’, Journal of Medical Imaging, 9(3). Available at: https://doi.org/10.1117/1.JMI.9.3.031509.

Muller B. et al. (2022) ‘Special Section Guest Editorial: Hard X-Ray Tomography with Micrometer Resolution’, Journal of Medical Imaging, 9(3). Available at: https://doi.org/10.1117/1.JMI.9.3.031501.

B. Müller (2022) ‘Recent trends in hard X-ray tomographic imaging’, Proceedings of SPIE - The International Society for Optical Engineering, 12242. Available at: https://doi.org/10.1117/12.2625223.

C. Tanner, B. Müller and G. Rodgers (2022) ‘Registration of microtomography images: Challenges and approaches’, Proceedings of SPIE - The International Society for Optical Engineering, 12242. Available at: https://doi.org/10.1117/12.2633922.

Humbel, Mattia et al. (2022) ‘Dental Composites for Wide Color Matching’, in Proceedings of SPIE - The International Society for Optical Engineering. SPIE (Proceedings of SPIE - The International Society for Optical Engineering). Available at: https://doi.org/10.1117/12.2613110.

Migga, Alexandra et al. (2022) ‘Comparative hard x-ray tomography for virtual histology of zebrafish larva, human tooth cementum, and porcine nerve’, Journal of medical imaging, 9(3), p. 031507. Available at: https://doi.org/10.1117/1.jmi.9.3.031507.

Muller, Bert et al. (2022) ‘Three-dimensional imaging and analysis of annual layers in tree trunk and tooth cementum’. SPIE. Available at: https://doi.org/10.1117/12.2615148.

Rodgers G et al. (2022) ‘Virtual histology of an entire mouse brain from formalin fixation to paraffin embedding. Part 2: Volumetric strain fields and local contrast changes’, Journal of Neuroscience Methods, 365, p. 109385. Available at: https://doi.org/10.1016/j.jneumeth.2021.109385.

Rodgers G. et al. (2021) ‘Virtual histology of an entire mouse brain from formalin fixation to paraffin embedding. Part 1: Data acquisition, anatomical feature segmentation, tracking global volume and density changes’, Journal of Neuroscience Methods, 364, p. 109354. Available at: https://doi.org/10.1016/j.jneumeth.2021.109354.

Migga, Alexandra et al. (2021) ‘Laboratory-based phase and absorption tomography for micro-imaging of annual layers in human tooth cementum, paraffin-embedded nerve and zebrafish embryo’, in SPIE Optical Engineering + Applications. San Diego, California, United States (SPIE Optical Engineering + Applications), p. 24.

Bornert F et al. (2021) ‘Mechanistic illustration: How newly‐formed blood vessels stopped by the mineral blocks of bone substitutes can be avoided by using innovative combined therapeutics’, Biomedicines, 9(8). Available at: https://doi.org/10.3390/biomedicines9080952.

Sacher, Mattia et al. (2021) ‘Accuracy of commercial intraoral scanners’, Journal of Medical Imaging, 8(3). Available at: https://doi.org/10.1117/1.JMI.8.3.035501.

Stutz C et al. (2021) ‘Eruption of bioengineered teeth: A new approach based on a polycaprolactone biomembrane’, Nanomaterials, 11(5). Available at: https://doi.org/10.3390/nano11051315.

Flury S et al. (2021) ‘Reentry of endodontic access cavities: composite residue and loss of tooth substance.’, Swiss dental journal, 131(7-8).

Ammann, Remi et al. (2021) ‘Three-dimensional analysis of aligner gaps and thickness distributions using advanced laboratory-based hard X-ray tomography’. SPIE. Available at: https://doi.org/10.1117/12.2592821.

Migga, Alexandra, Schulz, Georg et al. (2021) ‘Laboratory-based phase and absorption tomography for microimaging of annual layers in human tooth cementum, paraffinembedded nerve and zebrafish embryo’. SPIE. Available at: https://doi.org/10.1117/12.2597926.

Muller B. (2021) ‘Emerging developments in tomographic imaging with hard X-rays’. SPIE. Available at: https://doi.org/10.1117/12.2595054.

Müller, Bert (2021) ‘Emerging developments in tomographic imaging with hard X-rays’, in SPIE Optical Engineering + Applications. San Diego, California, United States: SPIE (SPIE Optical Engineering + Applications), p. 11. Available at: https://doi.org/10.1117/12.2595054.

Müller, Bert et al. (2021) ‘X-ray imaging of human brain tissue down to the molecule level’. SPIE. Available at: https://doi.org/10.1117/12.2592603.

Osterwalder, Melissa et al. (2021) ‘Three-dimensional X-ray microscopy of zebra sh larvae’, Bioinspiration, Biomimetics, and Bioreplication XI, 11586, p. 115860J. Available at: https://doi.org/10.1117/12.2583639.

Rodgers G. et al. (2021) ‘Non-rigid registration to determine strain fields during mouse brain fixation and embedding’. SPIE. Available at: https://doi.org/10.1117/12.2583632.

Rodgers G. et al. (2021) ‘Impact of fixation and paraffin embedding on mouse brain morphology: A synchrotron radiation-based tomography study’. SPIE. Available at: https://doi.org/10.1117/12.2595144.

Schulz G. et al. (2021) ‘Prehistoric beaten-copper cranium’. SPIE. Available at: https://doi.org/10.1117/12.2594279.

Tanner C. et al. (2021) ‘Extended-field synchrotron microtomography for non-destructive analysis of incremental lines in archeological human teeth cementum’. SPIE. Available at: https://doi.org/10.1117/12.2595180.

Osterwalder, Melissa et al. (2021) ‘Hard X-ray microtomography of Zebrafish larvae’, in XVII International Conference on X-Ray Lasers. Online Only (XVII International Conference on X-Ray Lasers), p. 16.

Kuchler-Bopp S et al. (2020) ‘Temporomandibular joint damage in K/BxN arthritic mice’, International Journal of Oral Science, 12(1), p. 5. Available at: https://doi.org/10.1038/s41368-019-0072-z.

Stutz C. et al. (2020) ‘A new polycaprolactone-based biomembrane functionalized with bmp-2 and stem cells improves maxillary bone regeneration’, Nanomaterials, 10(9), pp. 1–13. Available at: https://doi.org/10.3390/nano10091774.

Kuo W. et al. (2020) ‘Simultaneous Three-Dimensional Vascular and Tubular Imaging of Whole Mouse Kidneys with X-ray μcT’, Microscopy and Microanalysis, 26(4), pp. 731–740. Available at: https://doi.org/10.1017/S1431927620001725.

Mennecart B. et al. (2020) ‘Allometric and Phylogenetic Aspects of Stapes Morphology in Ruminantia (Mammalia, Artiodactyla)’, Frontiers in Earth Science, 8. Available at: https://doi.org/10.3389/feart.2020.00176.

Le N.A. et al. (2020) ‘Crosslinkable polymeric contrast agent for high-resolution X-ray imaging of the vascular system’, Chemical Communications, 56(44), pp. 5885–5888. Available at: https://doi.org/10.1039/c9cc09883f.

Osmani B. et al. (2020) ‘Hierarchically structured polydimethylsiloxane films for ultra-soft neural interfaces’, Micro and Nano Engineering, 7. Available at: https://doi.org/10.1016/j.mne.2020.100051.

Rodgers, Griffin et al. (2020) ‘Optimizing contrast and spatial resolution in hard x-ray tomography of medically relevant tissues’, Applied Physics Letters, 116(2). Available at: https://doi.org/10.1063/1.5133742.

Alt, Kurt W. et al. (2020) ‘A massacre of early Neolithic farmers in the high Pyrenees at Els Trocs, Spain’, Scientific reports, 10(1), p. 2131. Available at: https://doi.org/10.1038/s41598-020-58483-9.

Cörek, Emre et al. (2020) ‘Shedding Light on Metal-Based Nanoparticles in Zebrafish by Computed Tomography with Micrometer Resolution’, Small, 16(31), p. e2000746. Available at: https://doi.org/10.1002/smll.202000746.

Osterwalder, Melissa et al. (2020) ‘Hard X-ray microtomography of Zebrafish larvae’, Spiedigitallibrary, Conference Proceedings of SPIE, 11886, p. 118864. Available at: https://doi.org/10.1117/12.2593119.

Schulz, Georg et al. (2020) ‘Imaging the Orientation of Myelin Sheaths in a Non-Stained Histological Slice of Human Brain’, Precision Nanomedicine, 3(3), pp. 656–665. Available at: https://doi.org/10.33218/001c.17211.

Buscema, Marzia et al. (2019) ‘Ex vivo evaluation of an atherosclerotic human coronary artery via histology and high-resolution hard X-ray tomography’, Scientific Reports, 9(1). Available at: https://doi.org/10.1038/s41598-019-50711-1.

Matviykiv, Sofiya et al. (2019) ‘Small-Angle Neutron Scattering Study of Temperature-Induced Structural Changes in Liposomes’, Langmuir, 35(34), pp. 11210–11216. Available at: https://doi.org/10.1021/acs.langmuir.9b01603.

Bikis, Christos et al. (2019) ‘Sensitivity comparison of absorption and grating-based phase tomography of paraffin-embedded human brain tissue’, Applied Physics Letters, 114(8). Available at: https://doi.org/10.1063/1.5085302.

Bornert F. et al. (2019) ‘Cone-beam computed tomography - Magnetic resonance imaging registration in dento-maxillary imaging’. SPIEspie@spie.org. Available at: https://doi.org/10.1117/12.2530643.

Buscema, Marzia et al. (2019) ‘Spatially resolved small-angle X-ray scattering for characterizing mechanoresponsive liposomes using microfluidics’, Materials Today Bio, 1. Available at: https://doi.org/10.1016/j.mtbio.2019.100003.

Costeur L. et al. (2019) ‘Observations on the scaling relationship between bony labyrinth, skull size and body mass in ruminants’. SPIEspie@spie.org. Available at: https://doi.org/10.1117/12.2530702.

Kellner, Siri K. et al. (2019) ‘Imaging the internal structure of Borelis schlumbergeri Reichel (1937): Advances by high-resolution hard X-ray microtomography’, Palaeontologia Electronica, 22(1), pp. 1–19. Available at: https://doi.org/10.26879/854.

Kuo W. et al. (2019) ‘Evaluation of metal nanoparticle- and plastic resin-based x-ray contrast agents for kidney capillary imaging’. SPIEspie@spie.org. Available at: https://doi.org/10.1117/12.2529414.

Muller B. (2019) ‘Recent trends in high-resolution hard x-ray tomography’. SPIEspie@spie.org. Available at: https://doi.org/10.1117/12.2530085.

Nicklisch, Nicole et al. (2019) ‘An osseous lesion in the maxillary sinus-Tumour or tumour-like?’, International Journal of Osteoarchaeology, 29(2), pp. 183–190. Available at: https://doi.org/10.1002/oa.2727.

Rodgers, Griffin et al. (2019) ‘Correction of phase wrapping artifacts in grating-based hard x-ray tomography’. SPIEspie@spie.org. Available at: https://doi.org/10.1117/12.2530709.

Von Jackowski J. et al. (2019) ‘Three-dimensional characterization of soft silicone elements for intraoral device’. SPIEspie@spie.org. Available at: https://doi.org/10.1117/12.2529340.

Costeur L. et al. (2018) ‘The bony labyrinth of toothed whales reflects both phylogeny and habitat preferences’, Scientific Reports, 8(1). Available at: https://doi.org/10.1038/s41598-018-26094-0.

Rodgers, Griffin et al. (2018) ‘A quantitative correction for phase wrapping artifacts in hard X-ray grating interferometry’, Applied Physics Letters, 113(9). Available at: https://doi.org/10.1063/1.5045398.